Longitudinal evaluations of national electronic health record repositories often track document counts alone, obscuring changes in content size, structure and standards implementation. We decomposed growth in the Estonian Health Information System across document counts, per-document size, section-level structure and version uptake in a 10% random population sample of 4.97 million HL7 Clinical Document Architecture Release 2 documents from 147,819 patients, spanning 2012--2019 and four prespecified document types. Growth patterns differed by document type. Inpatient summaries increased 48.5% in total content volume despite a 2.4% decline in document counts. Section presence and within-section content were highly skewed; 44.6% of 892 data locations carried one fixed value. Code-system diversity increased from 45 to 79, and version uptake took years: inpatient summaries reached 80% organisational uptake after a median 44 months (95% CI 11--78). This decomposition can guide extraction pipelines, secondary use and standards governance in CDA- and FHIR-based repositories.